Hi Amber users,
I am looking for some advice as to how to run a periodic system with
a net charge within the box of -1. Looking at some old mailing list
information, I found the following suggestion:
http://archive.ambermd.org/200008/0040.html
However, this option doesn't seem to work any longer. Is there
another recommended way to run this simulation? I am interested in
finding out if there is a way to run periodic systems with net charge
or if it's necessary to always use a background charge that
neutralizes the system.
Thanks in advance for your help!
Jennie Thomas
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Received on Wed Nov 29 2006 - 06:07:55 PST
