AMBER: NTR for implicit solvent? How to defin restrain for two disconnected sequences?

From: a a <patd_2.hotmail.com>
Date: Fri, 24 Nov 2006 14:13:38 +0800

Dear All,

Could you mind to teach me if I could udr NTR=1 in implicit solvent
calculations? If yes, what can I do to define Residues 1 to 10 and 30 to 60
to be restrained. I learnt from tutorial 1, section 5 that I can type as
follows to define one continuous section to be restrained, but I cannot
restraint two disconnected sequences. What should I do ?

Please help!

Best regards,

Annie


/
Keep DNA fixed with weak restraints
10.0
RES 1 20
END
END

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Received on Sun Nov 26 2006 - 06:07:16 PST
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