Please disregard my previous message.  I realized that the reason I got
the error was because I had not loaded in the amber force field yet.
Thanks,
tz
 
________________________________
 
Hi everyone,
    I am following the antechamber tutorial and I am using amber9.
I have created "sustiva.frcmod  sustiva.prepin" according to the
tutorial and loaded them in xleap.  When I tried to solvate the molecule
using the command "solvateOct SUS TIP3PBOX 10" I got the following
message.  Why is it complaining like that?  
 
Loading parameters: /home/tlwin/local/amber9/dat/leap/parm/gaff.dat
Reading title:
AMBER General Force Field for organic mol., add. info. at the end (June,
2003)
Loading parameters: ./sustiva.frcmod
Reading force field modification type file (frcmod)
Reading title:
remark goes here
Loading Prep file: ./sustiva.prepin
solvateOct: Argument #1 is type String must be of type: [unit]
usage:  solvateOct <solute> <solvent> <buffer> [aniso] [closeness]
 
Thank you in advance,
ThuZar
 
 
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Received on Sun Nov 12 2006 - 06:07:24 PST