Thank a lot for your help. I got it.
I've another basic question. Now I try to divide a big molecule into some small residues. I calculate the charge for each of the residues by antechamber. Because each residue will delete one H atom, then can bind them together. How can I bind these residues together with total charge is 0?
Thank you very much.
esther B.
"David A. Case" <case.scripps.edu> wrote: On Fri, Oct 27, 2006, Esther Brugger wrote:
>
> /usr/bin/ld: skipping incompatible /usr/X11R6/lib/libXt.so when searching for -lXt
> /usr/bin/ld: skipping incompatible /usr/X11R6/lib/libXt.a when searching for -lXt
> /usr/bin/ld: cannot find -lXt
Please see
http://amber.ch.ic.ac.uk/archive/200606/0011.html
The simplest thing (I think) is to set CC to 'gcc -m32' in your config.h
file; then make clean and recompile (at least the leap part).
[Note: amber 8 is old enough that special tweaks for 64-bit systems were not
always available then. This and other problems should not exist with Amber
9.]
...good luck...dac
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Received on Wed Nov 01 2006 - 06:07:14 PST
