Dear Ross, thanks for your reply.
> It is probably unlikely that the code wants all 32GB of memory that you
> have. I suspect it is more likely that the code was compiled in 32 bit mode
> which means the maximum addressible memory is 2GB, regardless of how much
> you have in the machine. What compiler and version did you use to compile
> the code? What options did you pass to Amber's configure script?
Amber9 was compiled with pgi 6.1
the configure script for the serial compilation contained -opteron pgf90
as options. That of the parallel executables contained -mpi -opteron pgf90
Based on this, should I change these options or should I go back to
intel (we have intel 9.0)
Thanks a lot,
Giulio
--
Prof. Giulio Rastelli
Dipartimento di Scienze Farmaceutiche
Facolta' di Bioscienze e Biotecnologie
Universita' di Modena e Reggio Emilia
Via Campi 183
41100 Modena - ITALY
-------------------------------------
tel 0039-059-2055145
fax 0039-059-2055131
www.scifar.unimore.it/on-line/Home/Gruppidiricerca/Prof.GiulioRastelli.html
-------------------------------------
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Oct 29 2006 - 06:07:20 PST
