I'm not an expert in this area.
Since nobody answers, I want to give some idea.
See: http://www.rosswalker.co.uk/tutorials/amber_workshop/Tutorial_four/
and Amber8 tutorial Page 254-263.
On 10/25/06, Fenghui Fan <fenghui_fan.yahoo.com> wrote:
> Dear all,
>
> I want to do MD simulation of a phosphorylated
> protein. Will you please tell me from the
> unphosphorylated protein, how can we get the
> coordinate file of the phosphorylated protein? And
> then how can we get the parmtop and inpcrd files?
>
> Best regards.
>
> Fenghui Fan
>
>
>
> __________________________________________________
> Do You Yahoo!?
> Tired of spam? Yahoo! Mail has the best spam protection around
> http://mail.yahoo.com
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
>
--
Best wishes,
MYUNGGI YI
==================================
KLB 419
Institute of Molecular Biophysics
Florida State University
Tallahassee, FL 32306
Office: (850) 645-1334
http://www.scs.fsu.edu/~myunggi
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Oct 29 2006 - 06:07:19 PST
