Re: AMBER: Amber 9 installation problem

From: David A. Case <case.scripps.edu>
Date: Thu, 19 Oct 2006 11:43:35 -0700

On Thu, Oct 19, 2006, Cenk Andac wrote:

> One thing however I do not understand is the antechamber test for sustiva.
> partial atomic charges show high deviations from reference values as seen
> below

> < 1 C1 0.728 1.403 0.255 ca 1 SUS 0.049
> ---
> > 1 C1 0.728 1.403 0.255 ca 1 SUS 0.050
> 10,11c10,11
> < 4 C3 0.290 0.932 0.158 c3 1 SUS 0.315
> < 5 C4 1.635 0.352 0.032 c1 1 SUS 0.196
> ---
> > 4 C3 0.290 0.932 0.158 c3 1 SUS 0.314
> > 5 C4 1.635 0.352 0.032 c1 1 SUS 0.197
> 21,22c21,22
> < 15 C9 0.117 1.500 1.582 c3 1 SUS 0.619
> < 16 F1 1.056 2.097 1.693 f 1 SUS 0.229
> ---
> > 15 C9 0.117 1.500 1.582 c3 1 SUS 0.620
> > 16 F1 1.056 2.097 1.693 f 1 SUS 0.228

I don't understand: the largest deviation between the "<" lines and the ">"
lines is 0.001(?)

....dac

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Received on Sun Oct 22 2006 - 06:07:18 PDT
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