On Fri, Sep 22, 2006, priya priya wrote:
>
> I have a peptoid sequence (in peptoids the amino acid
> side chain is attached to the nitrogen instaed of
> carbon wrt proteins) of about 12-15 residues.
>
> I cannot load this molecule in antechamber.It says
> "The atom number exceeds the MAXATOM, reallocate
> memory".
Antechamber is designed to work with single residues at a time. You should
use it to create a unit for each peptoid residue you have, then use LEaP to
link them together into a polymer in the same way you would for a regular
protein.
...good luck...dac
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Received on Sun Sep 24 2006 - 06:07:18 PDT
