On Tue, Sep 19, 2006, linfu wrote:
>
> Does amber do MD using implicit solovent model(other than water)
> just by adjusting the parameter EXTDIEL=the dielectric of other solvents
> in md.in file? however the amber force field may not be parametrized to
> other solvents.
For a very rough idea of what happens in lower dielectrics, you could change
EXTDIEL. But this has not been tested or parameterized, so you should proceed
with caution.
...dac
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Received on Wed Sep 20 2006 - 06:07:20 PDT
