Dear Fenghui,
> As your e-mail said, if we input with sander ------ &,
> I can turn off my laptop and the cluster will run it.
> One thing I cannot understand is that when I turn off
> my laptop, there will be a *.rst file of the current
> running of the current MD. When I recheck my sanser
> after sometine, does the cluster give my laptop
> another another*.rst of the current ruuning to replace
> the one the computer saved before I turned off the
> laptop? In my opinion, the *.rst should shows the most
> recent MD status, however how does the *.rst in my
> working directory reflect this?
>
> As we know, after we finish the current MD we can use
> *.rst to get the latest PDB file.
This shows a fundamental misunderstanding of the way cluster based computing
and networked filesystems work. I suggest you take the time to read up on
the basics of clusters and remote filesystems.
Without knowing how your cluster is setup and where the files are written /
how jobs are submitted etc etc it is very hard to even understand what your
email above is asking let alone how to answer it.
I suspect that your laptop just mounts a remote file system on the cluster
over the network and you are just remotely connecting to this filesystem.
Beyond this everything else would be just a guess.
Please speak to the person running your cluster and ask them for a quick 30
minute introduction to how things work.
All the best
Ross
/\
\/
|\oss Walker
| HPC Consultant and Staff Scientist |
| San Diego Supercomputer Center |
| Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
|
http://www.rosswalker.co.uk | PGP Key available on request |
Note: Electronic Mail is not secure, has no guarantee of delivery, may not
be read every day, and should not be used for urgent or sensitive issues.
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Sep 20 2006 - 06:07:11 PDT
