AMBER: potential energy in the MD result

From: Fenghui Fan <>
Date: Thu, 14 Sep 2006 07:39:12 -0700 (PDT)

In Amber TUTORIAL 2, it says our binding energy is
then simply Ecomplex - Eprotein - Epeptide = -5.5831

Is this -5.5831 the deltaG which can be used to
calculate the K according to the function

I am looking forward to getting your reply.

Best regards.

Fenghui Fan

Do You Yahoo!?
Tired of spam? Yahoo! Mail has the best spam protection around
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Sun Sep 17 2006 - 06:07:13 PDT
Custom Search