Re: AMBER: Installing AMBER9 on cygwin (WinXP)

From: Gobind Singh Bisht <gsbisht1.gmail.com>
Date: Tue, 12 Sep 2006 17:27:06 +0530

hi,
    what compiler r u using? Try g95 for cygwin. That has worked for me.
cheers
gobind

On 9/12/06, HARADA Makoto <hmakoto.chem.titech.ac.jp> wrote:
>
> Hi,
>
> I'm installing amber 9 on cygwin.
> However I've got the following error message.
>
>
> ----------------------------------------------------------------------------
> cd antechamber; make install
> make[1]: Entering directory `/usr/local/amber9/src/antechamber'
> gcc -c -O2 -m32 -o antechamber.o antechamber.c
> In file included from antechamber.c:23:
> prep.c: In function `rprepc':
> prep.c:192: error: `gt' undeclared (first use in this function)
> prep.c:192: error: (Each undeclared identifier is reported only once
> prep.c:192: error: for each function it appears in.)
> prep.c:192: error: parse error before ';' token
> prep.c:214: error: continue statement not within a loop
> prep.c: At top level:
> prep.c:217: warning: parameter names (without types) in function
> declaration
> prep.c:217: warning: data definition has no type or storage class
> prep.c:218: error: parse error before "if"
> prep.c:221: error: `i' undeclared here (not in a function)
> prep.c:221: error: parse error before '.' token
> prep.c:222: error: `i' undeclared here (not in a function)
> prep.c:222: error: parse error before '.' token
> prep.c:223: error: `i' undeclared here (not in a function)
> prep.c:223: error: parse error before '.' token
> prep.c:224: error: parse error before '[' token
> prep.c:224: warning: data definition has no type or storage class
> prep.c:225: error: parse error before '[' token
> prep.c:225: warning: data definition has no type or storage class
> prep.c:229: error: `number' undeclared here (not in a function)
> prep.c:229: warning: data definition has no type or storage class
> prep.c:230: error: parse error before "return"
> antechamber.c:50: error: conflicting types for `atomnum'
> prep.c:229: error: previous declaration of `atomnum'
> make[1]: *** [antechamber.o] Error 1
> make[1]: Leaving directory `/usr/local/amber9/src/antechamber'
> make: *** [serial] Error 2
> --------------------------------------------------------------------------
>
> I have already patched my amber9.
> (bugfix.all)
>
> Please give me some idea.
>
> Have a nice day.
>
>
> ------------------------------------------
> M. Harada
> Department of Chemistry,
> Tokyo Institute of Technology, JAPAN
> e-Mail: hmakoto.chem.titech.ac.jp
> -----------------------------------------------------------------------
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>



-- 
----------------------------------------------------------------------------------------------------------------
Gobind Singh Bisht
Btech III year (Biotechnology and Biochemical Engineering)
Department Of Biotechnology
IIT Kharagpur, Kharagpur-721302
West Bengal, India
Ph No: +919932604909
Website: http://users.cjb.net/gobindbisht/
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Received on Wed Sep 13 2006 - 06:07:13 PDT
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