Dear Amber Community,
When doing a "saveamberparm" I get the following:
Building topology.
Building atom parameters.
For atom: .R<UNK 25>.A<H 2> Could not find type: HN
For atom: .R<UNK 25>.A<N1 7> Could not find type: NH
For atom: .R<UNK 25>.A<H8 8> Could not find type: HN
For atom: .R<UNK 25>.A<H9 9> Could not find type: HN
and the UNK residue is one that was created using antechamber. I'm loading in
the leaprc.rna.ff99 and the leaprc.gaff force fields. What am I doing wrong?
Thanks,
SETH
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Sep 10 2006 - 06:07:27 PDT
