Re: AMBER: generate "template" frcmod from standard residues?

From: David A. Case <case.scripps.edu>
Date: Thu, 17 Aug 2006 11:01:45 -0700

On Thu, Aug 17, 2006, mernst.tricity.wsu.edu wrote:

> If I do that, won't the template be devoid of assigned parameters? I want
> the parameters to initially reflect the standard force field parameters for
> a standard nucleotide so that I can alter them a bit rather than
> parameterizing the entire residue by hand. Maybe altered amino acids and
> nucleotides are less commonly used than I imagined.

Sorry...I guess I didn't understand what you wanted to do....dac

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Aug 20 2006 - 06:07:13 PDT
Custom Search