AMBER: cutting the box after "solvatebox"

From: Vlad Cojocaru <Vlad.Cojocaru.eml-r.villa-bosch.de>
Date: Tue, 08 Aug 2006 14:12:37 +0200

Dear Amber users,

I created a box around a solute (loaded as pdb) using "solvatebox sol
TIP3PBOX {0 20 0}". However, I need to cut out from this box about 5A
from each side of the x and y directions and about 10A from 1 side of
the z direction. Is there any tool in Amber that can do that?

Thanks

vlad 


-- 
Dr. Vlad Cojocaru
EML Research gGmbH
Molecular and Cellular Modeling Group
Schloss-Wolfsbrunnenweg 33
69118 Heidelberg, Germany
Phone: +49-6221-533266
Fax: +49-6221-533298
e-mail: Vlad.Cojocaru.eml-r.villa-bosch.de
http://projects.villa-bosch.de/mcm/people/cojocaru/
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Received on Wed Aug 09 2006 - 06:07:12 PDT
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