Re: AMBER: How to strip waters in trajectorie ?

From: Gustavo Seabra <>
Date: Mon, 12 Jun 2006 15:57:30 -0400

You can use ptraj to do that. The fist example for ptraj in the amber
manual does that.

Gustavo Seabra.

On 6/12/06, jitrayut jitonnom <> wrote:
> Dear amber users
> I am a new users for amber so could anyone explain me about how to strip
> waters in a trajectorie file that obtained from explicit MD ? or maybe, what
> is an example of the script to do this ? These are my questions needed the
> answers from anyone.
> Thanks in advance for any suggestions
> Best regard
> Jitrayut
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Wed Jun 14 2006 - 06:07:12 PDT
Custom Search