Re: AMBER: does the Amber8 or Amber9 contains Br,I and Sulfur parameter for MM-PBSA or MM-GBSA.

From: David A. Case <case.scripps.edu>
Date: Wed, 7 Jun 2006 15:22:41 -0700

On Tue, Jun 06, 2006, linfu wrote:
>
> when doing the MM-PBSA or MM-GBSA, does the Amber8 or Amber9 contains Br,I
> and Sulfur parameter for PB or GB.

Sulfur is certainly there; surface area parameters and intrinsic Born radii
have not been worked out carefully for bromine and iodine.

...dac

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Received on Sun Jun 11 2006 - 06:07:09 PDT
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