Re: AMBER: Question about .off file

From: Ilyas Yildirim <yildirim.pas.rochester.edu>
Date: Fri, 26 May 2006 04:58:19 -0400 (EDT)

> !entry.ETOHBOX.unit.connect array int
> 0
> 2301 - values in my .off file

I think this should be

!entry.ETOHBOX.unit.connect array int
 0
 0

This part is giving info on the joint parts of the residues. In your case,
you dont have any such joint regions. In the nucleic acid .off files,
depending on the name of the residue (RX, RX3, RX5), u will have non-zero
values, which defines the joint atoms.

Good luck... 

-- 
  Ilyas Yildirim
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Received on Fri May 26 2006 - 21:05:24 PDT
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