I am having problems with sander when imin = 5. Specifically, the -y (inptraj)
flag isn't recognised. i.e.
mdfil: Error unknown flag: -y
usage: sander [-O|A] -i mdin -o mdout -p prmtop -c inpcrd -r restrt
[-ref refc -x mdcrd -v mdvel -e mden -idip inpdip -rdip
rstdip -mdip mddip -ng numgroup -remlog remlog -rem [0|1|2] -inf mdinfo -radii
radii]
Consult the manual for additional options.
The usage described in the manual is inconsistent with this in that the -y flag
appears to be supported.
Is this a bug or just an error of mine?
Cheers,
Francis Peters
University of NSW
Sydney, Australia
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Received on Wed May 03 2006 - 06:07:06 PDT
