You need to modify your FRCMOD file for the new bond you are creating, or at
least that is what i had to do.
>From: <Jiapu.Zhang.csiro.au>
>Reply-To: amber.scripps.edu
>To: <owner-amber.scripps.edu>
>CC: <amber.scripps.edu>
>Subject: AMBER: How to use XLEAP to link one atom in a monomer to another
>atom in another monomer? (where both the 2 monomers are in a same pdb file)
>Date: Mon, 21 Nov 2005 12:35:57 +1100
>
>
>
>Dear friends,
>
>How to use XLEAP to link one atom in a monomer to another atom in
>another monomer (where both the 2 monomers are in a same pdb file)?
>
>Faithfully yours,
>Jiapu
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Received on Mon Nov 21 2005 - 23:53:00 PST
