Does anyone know of a method to quantify how much DNA has been
perterbed during a MD run? I have done MD simulations of DNA with a
cross-linker of various lengths in it. I need to compare how much each
linker perterbed the DNA. Does anyone have any ideas?
Thank you,
Kara Di Giorgio
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Received on Wed Nov 16 2005 - 01:53:00 PST
