AMBER: bond parameters

From: Gustavo Pierdominici Sottile <gsottile.unq.edu.ar>
Date: Wed, 03 Aug 2005 11:39:34 -0300

Dear amber users,
                         I have already defined a new aminoacid which has
two carbon atoms (both type C) bonded. I look at parm94.dat and the
parameters for C-C are not present. Surprisingly, when using tleap -f
leaprcff.94, these parameters are not absent. How can I see which are the
parameters that leap reads for C-C interaction?
pd: I use desc to see if the bond topology was ok, and it looks well
Thanking in advance
Gustavo

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Aug 03 2005 - 15:53:00 PDT
Custom Search