You should look the sander_com.1.out to see the problem, whether the
top or the crd file is fited correctly.
On Jul 29, 2005, at 5:10 PM, Wei Chen wrote:
> Hi,
>
> When I ran mm_pbsa.pl xxx in amber8, some errors occur as follow:
>
> mpirun must be used to launch all MPI applications
> /gt/lib1/Library/amber8/exe/sander -O -i sander_com.in -o
> sander_com.1.out -
> c ./hFc1_CD16B_na2_com.crd.1 -p ./hFc1_CD16B_na2_minimize.prmtop
> not successful
>
> Anybody knows how to solve this problem?
>
> Wei Chen
>
> --
>
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----------------------------------------------------------------------
Suxin Zheng
Research Associate
Box 351700
Department of Chemistry, University of Washington
Seattle, WA, 98195-1700
sxzheng.u.washington.edu
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Received on Sat Jul 30 2005 - 01:53:01 PDT
