Re: AMBER: Adding residues to a DNA sequence

From: David A. Case <>
Date: Wed, 27 Jul 2005 14:31:16 -0700

On Mon, Jul 25, 2005, Kara Di Giorgio wrote:

> How do you suggest superimposing the residues? What program would you
> suggest using? How do I replace the two residues with the longer
> regular helix. I had thought of this but didn't know how to do it.

Well, *I* would use NAB (, but there are lots
of programs that can superimpose parts of molecules on top of one another,
often in a visual fashion (e.g. in VMD) so that you can see immediately if
it did what you want or not.


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Received on Wed Jul 27 2005 - 22:53:00 PDT
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