Just a guess, but you might make sure your head and tail atoms are identified
correctly so the proper connections are made. Probably need to give more info on
what weird means...
G'luck,
Kristina
Quoting "Douali, Latifa" <latifa.douali.pnl.gov>:
> Dear amber users,
>
>
> I have created a new nucleic acid residue. When I edit my new monomer
> residue in xleap it looks fine. When I try to insert it into a polymer,
> I obtain a weird structure. (I load the polymer by loadpdb command in
> Xleap)
> How can I make nucgen recognise my new residue?
>
> Thank you very much
>
> Latifa
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
>
-----------------------------------------------------------------
Kristina E. Furse
Department of Chemistry
Center for Structural Biology
Vanderbilt University
Email: kristina.e.furse.Vanderbilt.Edu
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Jul 27 2005 - 02:53:00 PDT
