How do you visualize the trajectory? Do you use VMD? Do you select "crd"
instead of "crdbox" for your trajectory?
Best,
Jufang
----Original Message Follows----
From: <glc0358.vip.sina.com>
Reply-To: amber.scripps.edu
To: amber.scripps.edu
Subject: RE: Re: AMBER:
Date: Sat, 09 Jul 2005 18:37:54 +0800
Dear Zhiguo Liu:
Thank you for your help! Actually I visualized the trajectory by the
prmtop file which I used for the minimization and MD. Maybe I should run
the minimization for more time?
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sat Jul 09 2005 - 20:53:00 PDT
