AMBER: loading DNA-RNA hybrid in xleap

From: <cbala.igib.res.in>
Date: Sat, 02 Jul 2005 15:36:59 +0000

dear amberites,

good day. i tried to load a DNA-RNA hybrid in xleap. the sequence are as
follows

5- D(CpTpGpApTpApTpGpC) -3
5- R(GpCpApUpApUpCpApG) -3
when i load this into xleap, it creates new unit for Uracil . I wish to
know whether we can load hybrid structures in xleap. Im getting the
error only for uracil.herewith i have attached the coordinate file.

thanks in advance.
C.Bala



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Received on Sat Jul 02 2005 - 16:53:00 PDT
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