AMBER: leap bond error

From: Stern, Julie <jvstern.bnl.gov>
Date: Thu, 31 Mar 2005 20:11:29 -0500

Hello,
    I'm getting the following error while doing the saveamberparm
command: 5 and 7 are a single bond but 5 is part of a triple bond and
7 is part of a benzene ring, but I wouldn't think that would matter since
other bonds with the same characteristics were made.
    Does anyone have an idea what is wrong and how I should fix it?

Thanks.


!FATAL ERROR----------------------------------------
!FATAL: In file [unitio.c], line 1766
!FATAL: Message: 1-4: cannot add bond 5 7
!
!ABORTING.


--Julie
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Received on Fri Apr 01 2005 - 02:53:01 PST
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