AMBER: Minimization failure

From: S.Sundar Raman <>
Date: Wed, 30 Mar 2005 10:17:22 +0530

dear all
i build a poly valine sequence using xleap. i tired to minimise the
system in water box and gas phase. both ended in repeated laminin
failure. but when i did the same system using discover minimzation
program, it minimized upto 0.001 RMS deviation value. how to minimuse
this using AMBER please help me in this regrad

S.Sundar Raman
Chemical Lab,
ph: 044-24411830
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Received on Wed Mar 30 2005 - 05:53:00 PST
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