Dear Amber-users
how to calculate ligand's rmsd by fitting all protein atoms (or CA atoms) ?
how to set carnal_rms.in, and then I can use carnal <carnal_rms.in ?
anyone can provide this input file?
thanks in advance
Yong Xu
yxu.mail.sioc.ac.cn
2004-12-09
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* Yong Xu
* State Key Lab of Bioorganic & Natural Product Chemistry
* Shanghai Institute of Organic Chemistry
* Chinese Academy of Science
* 354 Feng Lin Road, Xu Hui District
* Shanghai, 200032, China
* Email: yxu.mail.sioc.ac.cn
* yxuemail.sina.com
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Received on Fri Dec 24 2004 - 00:53:00 PST
