Re: AMBER: sander error

From: Jiten <jiten.postech.ac.kr>
Date: Sat, 30 Oct 2004 16:58:33 +0900

Hello,

It shows that your crd (also top file) do not contain the box informations.
If your system doesn't require periodic boundary condition, set ntb=0
(default is ntb=1 for cosntant volume)

Jiten

----- Original Message -----
From: "Xiao He" <hx.itcc.nju.edu.cn>
To: "amber" <amber.scripps.edu>
Sent: Saturday, October 30, 2004 3:49 PM
Subject: AMBER: sander error


> Dear amber users,
>
> My crd and top files are from tleap
>
> Minimization with Cartesian restraints for the solute
> &cntrl
> imin=1,ncyc=30,maxcyc=1000,
> ntpr=5,
> ntr=1,
> &end
> Group input for restrained atoms
> 100.0
> RES 1 927
> END
> END
>
>
> --------------------------------------------------------------------------------
> 1. RESOURCE USE:
> --------------------------------------------------------------------------------
>
> | Flags:
> getting new box info from bottom of inpcrd
> | peek_ewald_inpcrd: Box info not found in inpcrd
>
> Thanks!
>
>
>         Xiao He
>         hx.itcc.nju.edu.cn
>           2004-10-30
>
>
>
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Received on Sat Oct 30 2004 - 09:53:00 PDT
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