Re: AMBER: getting new box info

From: David A. Case <case.scripps.edu>
Date: Thu, 28 Oct 2004 07:39:07 -0700

On Thu, Oct 28, 2004, Vincent Bisetty wrote:


> I am experiencing problems with the restart of the MD simulation
> It seems like the box info is not being read?
>
> Here is the input file:
>
> equilibration at 300 K using PME
> "out16900a17000ps.out" 47 lines, 2772 characters <== is this really in
                                                        the output file?
> /
> &ewald
> skinnb = 1.0,
> /
>
>
>
> --------------------------------------------------------------------------------
> 1. RESOURCE USE:
> --------------------------------------------------------------------------------
>
> | Flags: SGIFFT MPI
> getting new box info from bottom of inpcrd <== this is a normal line
                                                     it does not indicate
                                                     a problem

>

You error may be something different than you think. The line about getting
box information is expected (you should see that in all of your simulations,
I think).

More investigation will probably be necessary to figure out what is happening.

....good luck...dac

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Thu Oct 28 2004 - 15:53:01 PDT
Custom Search