AMBER: minimization problem

From: hj zou <hjzou.iris3.simm.ac.cn>
Date: Sat, 25 Sep 2004 17:30:11 +0800

Dear amber users,
    When I want to minimize a liand with water,it doesnot work.The following is the part of output information.

      3. ATOMIC COORDINATES AND VELOCITIES
--------------------------------------------------------------------------------

MOL
 begin time read from input coords = 0.000 ps

| Reorder water Setup:
| ----- Reordering water will NOT be done
| Does not work with minimization
|
 Number of triangulated 3-point waters found: 4220

        
   can anyone give me some suggestions?
   Thank you in advance.
   hjzou



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Received on Sat Sep 25 2004 - 10:53:00 PDT
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