./configure sparc 
AMBERHOME is set to /home/users/harpreet/amber7
Setting up Amber configuration file for architecture: sparc
Using parallel communications library: none
 
The configuration file, config.h, was successfully created.
 
 32% make serial
grep: illegal option -- q
Usage: grep -hblcnsviw pattern file . . .
Starting installation of Amber8 (serial) at Sat Jul 24 11:37:44 GMT 2004.
mkdir ../exe
mkdir: Failed to make directory "../exe"; File exists
*** Error code 2 (ignored)
cd lib; make install
/lib/cpp -P -I/home/users/harpreet/amber7/src/include  new2oldparm.f > _new2oldp
f90 -c -O1     -o new2oldparm.o _new2oldparm.f
/lib/cpp -P -I/home/users/harpreet/amber7/src/include  nxtsec.f > _nxtsec.f
f90 -c -O1     -o nxtsec.o _nxtsec.f
f90     -o new2oldparm new2oldparm.o nxtsec.o
mv new2oldparm ../../exe
/bin/rm _*.f
cd addles; make install
/lib/cpp -P -I/home/users/harpreet/amber7/src/include  lesmain.f > _lesmain.f
f90 -c -O1     -o lesmain.o _lesmain.f
^C
*** lesmain.o removed.
 33% make clean
cd lib; make clean
/bin/rm malloc_test new2oldparm *.o _*.f *.a
malloc_test: No such file or directory
new2oldparm: No such file or directory
_*.f: No such file or directory
*.a: No such file or directory
*** Error code 2 (ignored)
cd blas; make clean
/bin/rm -f *.o blas.a _*.f
cd lapack; make clean
/bin/rm -f *.o lapack.a _*.f
cd lmod; make clean
/bin/rm -f *.a
cd xmin; make clean
/bin/rm -f *.o _*.f
cd nvib; make clean
/bin/rm -f *.o _*.f
cd lmod; make clean
/bin/rm -f *.o _*.f
cd arpack; make clean
/bin/rm -f *.o _*.f arpack.a
cd addles; make clean
/bin/rm *.o _*.f addles
*.o: No such file or directory
addles: No such file or directory
*** Error code 2 (ignored)
cd sander; make clean
/bin/rm sander sander.LES sander.QMMM psander
sander: No such file or directory
sander.LES: No such file or directory
sander.QMMM: No such file or directory
psander: No such file or directory
*** Error code 2 (ignored)
/bin/rm ambmask
ambmask: No such file or directory
*** Error code 2 (ignored)
/bin/rm *.o
*.o: No such file or directory
*** Error code 2 (ignored)
/bin/rm _*.f
_*.f: No such file or directory
*** Error code 2 (ignored)
/bin/rm *.mod
*.mod: No such file or directory
*** Error code 2 (ignored)
/bin/rm *.d
*.d: No such file or directory
*** Error code 2 (ignored)
cd divcon; make clean
/bin/rm -f libdivcon.a *.o divcon block.o _*.f
cd ptraj; make clean
cd pdb; make clean
rm -f pdbrun.o pdb_read.o pdb_sprntf.o pdb_sscanf.o pdb_write.o ms.o libpdb.a
/bin/rm -f main.o rdparm.o dispatch.o help.o utility.o second.o  io.o trajectoryxperimental.o ptraj.o actions.o analyze.o  thermo.o pubfft.o rdparm ptraj
/bin/rm _*.f
_*.f: No such file or directory
*** Error code 2 (ignored)
cd nmr_aux; make clean
cd prepare_input; make clean 
/bin/rm *.o _*.f makeDIST_RST makeANG_RST makeSHF.cp makeCHIR_RST.cp \
        makeDIP_RST.protein.cp makeDIP_RST.dna.cp
*.o: No such file or directory
_*.f: No such file or directory
makeDIST_RST: No such file or directory
makeANG_RST: No such file or directory
makeSHF.cp: No such file or directory
makeCHIR_RST.cp: No such file or directory
makeDIP_RST.protein.cp: No such file or directory
makeDIP_RST.dna.cp: No such file or directory
*** Error code 2 (ignored)
cd fantasian; make clean 
/bin/rm *.o _*.f fantasian
*.o: No such file or directory
_*.f: No such file or directory
fantasian: No such file or directory
*** Error code 2 (ignored)
cd nmode; make clean
/bin/rm *.o _*.f nmode nmanal
*.o: No such file or directory
_*.f: No such file or directory
nmode: No such file or directory
nmanal: No such file or directory
*** Error code 2 (ignored)
cd resp; make clean
/bin/rm *.o _*.f resp reformat replace_charges
*.o: No such file or directory
_*.f: No such file or directory
resp: No such file or directory
reformat: No such file or directory
replace_charges: No such file or directory
*** Error code 2 (ignored)
cd protonate; make clean
/bin/rm *.o _*.f pol_h protonate gwh
*.o: No such file or directory
_*.f: No such file or directory
pol_h: No such file or directory
protonate: No such file or directory
gwh: No such file or directory
*** Error code 2 (ignored)
cd etc; make clean
/bin/rm *.o _*.f ambpdb nucgen
*.o: No such file or directory
_*.f: No such file or directory
ambpdb: No such file or directory
nucgen: No such file or directory
*** Error code 2 (ignored)
cd antechamber; make clean
rm -f *.o am1bcc  antechamber  atomtype  bondtype  crdgrow  database  espgen  pa
cd mm_pbsa; make clean
/bin/rm *.o _*.f  make_crd_hg molsurf
*.o: No such file or directory
_*.f: No such file or directory
make_crd_hg: No such file or directory
molsurf: No such file or directory
*** Error code 2 (ignored)
cd pbsa; make clean
/bin/rm pbsa 
pbsa: No such file or directory
*** Error code 2 (ignored)
/bin/rm *.o
*.o: No such file or directory
*** Error code 2 (ignored)
/bin/rm _*.f
_*.f: No such file or directory
*** Error code 2 (ignored)
/bin/rm *.mod
*.mod: No such file or directory
*** Error code 2 (ignored)
/bin/rm *.d
*.d: No such file or directory
*** Error code 2 (ignored)
cd anal; make clean
/bin/rm *.o _*.f anal
*.o: No such file or directory
_*.f: No such file or directory
anal: No such file or directory
*** Error code 2 (ignored)
cd leap; make clean
cd src/Wc; make clean
/bin/rm *.o *.a
*.o: No such file or directory
*.a: No such file or directory
*** Error code 2 (ignored)
cd src/Xmu; make clean
/bin/rm *.o *.a
*.o: No such file or directory
*.a: No such file or directory
*** Error code 2 (ignored)
cd src/Xpm; make clean
/bin/rm *.o *.a
*.o: No such file or directory
*.a: No such file or directory
*** Error code 2 (ignored)
cd src/Xraw; make clean
/bin/rm *.o *.a
*.o: No such file or directory
*.a: No such file or directory
*** Error code 2 (ignored)
cd src/leap; make clean
/bin/rm *.o xaLeap teLeap utilMakeHelp utilDescribeTopology utilCrd2Off mol2_to_
*.o: No such file or directory
xaLeap: No such file or directory
teLeap: No such file or directory
utilMakeHelp: No such file or directory
utilDescribeTopology: No such file or directory
utilCrd2Off: No such file or directory
mol2_to_off: No such file or directory
utilConvertWaterBox: No such file or directory
utilLib2Pdb: No such file or directory
*~: No such file or directory
*** Error code 2 (ignored)
/bin/rm XaLeap_wcl
XaLeap_wcl: No such file or directory
*** Error code 2 (ignored)
/bin/rm *.gprof
*.gprof: No such file or directory
*** Error code 2 (ignored)
/bin/rm parser.c
parser.c: No such file or directory
*** Error code 2 (ignored)
/bin/rm helptext.c
helptext.c: No such file or directory
*** Error code 2 (ignored)
cd pmemd; make clean
cd src; make clean
/bin/rm -f pmemd *.o _*_.f* *.lst *.mod *.d work.pc*
 34% pwd
/usr2/users/anshul/amber8/src
 35% cd
 36% emacs .cshrc&
[1] 581
 37% ls
AMBER8.tar    amber8/       misc/
ala/          mhc/          public_html/
 38% cd
 39% more .cshrc
#
# This is the default standard .cshrc provided to csh users.
# They are expected to edit it to meet their own needs.
#
# The commands in this file are executed each time a new csh shell
# is started.
#
# $Revision: 1.1 $
#

# list directories in columns
alias ls 'ls -p'
alias l 'ls -l'
alias ps 'ps -u aarti'
alias rm 'rm -i'
alias era 'emacs -bg black -fg white'
# Remember last 100 commands
set history = 100
setenv LD_LIBRARY_PATH /usr/local/lib
# For interactive shells, set the prompt to show the host name and event number.
set path=($path . /bin /usr/local/bin /home/users/bissac/bin /usr5/users/aarti/h
uman_protein/proset /usr4/software/emacs-21.2/src /home/users/harpreet/weka/weka
-3-2 /usr/bin /usr/sbin /usr/ccs/bin /usr1/postgres/bin /usr1/local/lib /usr1/lo
cal/include/g++-3 /opt/SUNWspro/WS6U2/bin /home/users/harpreet/promotif/)
        if ( -o /bin/su ) then
                set prompt="`hostname -s` \!# "
        else
                set prompt="`hostname -s` \!% "
        endif
endif
setenv motifdir /home/users/harpreet/promotif/
setenv BLAST_DAT /usr3/blastpr/data
setenv BLAST_DIR /usr3/blastpr
setenv CLUSTAL_DIR /home/users/harpreet/clustalw
setenv CLASSPATH /home/users/harpreet/weka/weka-3-2/weka.jar
 40% source .cshrc
[1]    Done                          emacs .cshrc
uname: not super user
 41% cd amber8/
 42% cd src
 43% ./configure sparc
AMBERHOME is set to /usr2/users/anshul/amber8/
Setting up Amber configuration file for architecture: sparc
Using parallel communications library: none
 
The configuration file, config.h, was successfully created.
 
 44% make serial
grep: illegal option -- q
Usage: grep -hblcnsviw pattern file . . .
Starting installation of Amber8 (serial) at Sat Jul 24 11:43:18 GMT 2004.
mkdir ../exe
mkdir: Failed to make directory "../exe"; File exists
*** Error code 2 (ignored)
cd lib; make install
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  new2oldparm.f > _new2oldparm.f
f90 -c -O1     -o new2oldparm.o _new2oldparm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nxtsec.f > _nxtsec.f
f90 -c -O1     -o nxtsec.o _nxtsec.f
f90     -o new2oldparm new2oldparm.o nxtsec.o
mv new2oldparm ../../exe
/bin/rm _*.f
cd addles; make install
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  lesmain.f > _lesmain.f
f90 -c -O1     -o lesmain.o _lesmain.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  addspace.f > _addspace.f
f90 -c -O1     -o addspace.o _addspace.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  readprm.f > _readprm.f
f90 -c -O1     -o readprm.o _readprm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  writprm.f > _writprm.f
f90 -c -O1     -o writprm.o _writprm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  readcrd.f > _readcrd.f
f90 -c -O1     -o readcrd.o _readcrd.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  writcrd.f > _writcrd.f
f90 -c -O1     -o writcrd.o _writcrd.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  pick.f > _pick.f
f90 -c -O1     -o pick.o _pick.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  rline.f > _rline.f
f90 -c -O1     -o rline.o _rline.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nxt.f > _nxt.f
f90 -c -O1     -o nxt.o _nxt.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  intgr.f > _intgr.f
f90 -c -O1     -o intgr.o _intgr.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  find.f > _find.f
f90 -c -O1     -o find.o _find.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  of.f > _of.f
f90 -c -O1     -o of.o _of.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  geti.f > _geti.f
f90 -c -O1     -o geti.o _geti.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  unit.f > _unit.f
f90 -c -O1     -o unit.o _unit.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  getc.f > _getc.f
f90 -c -O1     -o getc.o _getc.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  alert.f > _alert.f
f90 -c -O1     -o alert.o _alert.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  echo.f > _echo.f
f90 -c -O1     -o echo.o _echo.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  get4c.f > _get4c.f
f90 -c -O1     -o get4c.o _get4c.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  getd.f > _getd.f
f90 -c -O1     -o getd.o _getd.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  wlesprm.f > _wlesprm.f
f90 -c -O1     -o wlesprm.o _wlesprm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  lesprm.f > _lesprm.f
f90 -c -O1     -o lesprm.o _lesprm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  les2prm.f > _les2prm.f
f90 -c -O1     -o les2prm.o _les2prm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  checksz.f > _checksz.f
f90 -c -O1     -o checksz.o _checksz.f
cd ../lib; ./Makelist ../lib/random.o ../lib/mexit.o  ../lib/nxtsec.o
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  random.f > _random.f
f90 -c -O1     -o random.o _random.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  mexit.f > _mexit.f
f90 -c -O1     -o mexit.o _mexit.f
`nxtsec.o' is up to date.
f90     -o addles lesmain.o addspace.o readprm.o  writprm.o readcrd.o writcrd.o   pick.o         rline.o   nxt.o  intgr.o   find.o    of.o  geti.o    unit.o    getc.o  alert.o   echo.o    get4c.o  getd.o    wlesprm.o lesprm.o  les2prm.o checksz.o ../lib/random.o ../lib/mexit.o  ../lib/nxtsec.o -xlic_lib=sunperf -lm
mv addles ../../exe
cd sander; make serial
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   trace.f > _trace.f
f90 -c -O2   -free  -o trace.o _trace.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   lmod.f > _lmod.f
f90 -c -O2   -free  -o lmod.o _lmod.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  decomp.f > _decomp.f
f90 -c -O1   -free  -o decomp.o _decomp.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   icosasurf.f > _icosasurf.f
f90 -c -O2   -free  -o icosasurf.o _icosasurf.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   egb.f > _egb.f
f90 -c -O2   -free  -o egb.o _egb.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  findmask.f > _findmask.f
f90 -c -O1   -free  -o findmask.o _findmask.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   pb_force.f > _pb_force.f
f90 -c -O2   -free  -o pb_force.o _pb_force.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   fastwt.f > _fastwt.f
f90 -c -O2   -free  -o fastwt.o _fastwt.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  sander.f > _sander.f
f90 -c -O1   -free  -o sander.o _sander.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   cshf.f > _cshf.f
f90 -c -O2   -free  -o cshf.o _cshf.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  noecalc.f > _noecalc.f
f90 -c -O1   -free  -o noecalc.o _noecalc.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  noeread.f > _noeread.f
f90 -c -O1   -free  -o noeread.o _noeread.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   caldis.f > _caldis.f
f90 -c -O2   -free  -o caldis.o _caldis.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   calrate.f > _calrate.f
f90 -c -O2   -free  -o calrate.o _calrate.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   dinten.f > _dinten.f
f90 -c -O2   -free  -o dinten.o _dinten.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   drates.f > _drates.f
f90 -c -O2   -free  -o drates.o _drates.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   indexn.f > _indexn.f
f90 -c -O2   -free  -o indexn.o _indexn.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   kmat.f > _kmat.f
f90 -c -O2   -free  -o kmat.o _kmat.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  pearsn.f > _pearsn.f
f90 -c -O1   -free  -o pearsn.o _pearsn.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  plane.f > _plane.f
f90 -c -O1   -free  -o plane.o _plane.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   remarc.f > _remarc.f
f90 -c -O2   -free  -o remarc.o _remarc.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrcal.f > _nmrcal.f
f90 -c -O1   -free  -o nmrcal.o _nmrcal.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrred.f > _nmrred.f
f90 -c -O1   -free  -o nmrred.o _nmrred.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  restal.f > _restal.f
f90 -c -O1   -free  -o restal.o _restal.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  getnat.f > _getnat.f
f90 -c -O1   -free  -o getnat.o _getnat.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrnrg.f > _nmrnrg.f
f90 -c -O1   -free  -o nmrnrg.o _nmrnrg.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  modwt.f > _modwt.f
f90 -c -O1   -free  -o modwt.o _modwt.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  disnrg.f > _disnrg.f
f90 -c -O1   -free  -o disnrg.o _disnrg.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  angnrg.f > _angnrg.f
f90 -c -O1   -free  -o angnrg.o _angnrg.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  tornrg.f > _tornrg.f
f90 -c -O1   -free  -o tornrg.o _tornrg.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrprt.f > _nmrprt.f
f90 -c -O1   -free  -o nmrprt.o _nmrprt.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrgrp.f > _nmrgrp.f
f90 -c -O1   -free  -o nmrgrp.o _nmrgrp.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrcms.f > _nmrcms.f
f90 -c -O1   -free  -o nmrcms.o _nmrcms.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrcmf.f > _nmrcmf.f
f90 -c -O1   -free  -o nmrcmf.o _nmrcmf.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  impnum.f > _impnum.f
f90 -c -O1   -free  -o impnum.o _impnum.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrsht.f > _nmrsht.f
f90 -c -O1   -free  -o nmrsht.o _nmrsht.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  at2res.f > _at2res.f
f90 -c -O1   -free  -o at2res.o _at2res.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  chklin.f > _chklin.f
f90 -c -O1   -free  -o chklin.o _chklin.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  opnmrg.f > _opnmrg.f
f90 -c -O1   -free  -o opnmrg.o _opnmrg.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  printe.f > _printe.f
f90 -c -O1   -free  -o printe.o _printe.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  runmin.f > _runmin.f
f90 -c -O1   -free  -o runmin.o _runmin.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  ndvprt.f > _ndvprt.f
f90 -c -O1   -free  -o ndvprt.o _ndvprt.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   force.f > _force.f
f90 -c -O2   -free  -o force.o _force.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  rdparm.f > _rdparm.f
f90 -c -O1   -free  -o rdparm.o _rdparm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  mdread.f > _mdread.f
f90 -c -O1   -free  -o mdread.o _mdread.f

      call cnstphread(ix(icpstinf),ix(icpresst),ix(icpptcnt), &
                        ^                                       
"_mdread.f", Line = 2951, Column = 25: WARNING: Procedure "CNSTPHREAD" is defined at line 1246 (_mdread.f).  The actual argument type does not agree with the type of dummy argument "STATEINF".

f90: COMPILE TIME 2.180000 SECONDS
f90: MAXIMUM FIELD LENGTH 5974574 DECIMAL WORDS
f90: 3686 SOURCE LINES
f90: 0 ERRORS, 1 WARNINGS, 0 OTHER MESSAGES, 0 ANSI
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  locmem.f > _locmem.f
f90 -c -O1   -free  -o locmem.o _locmem.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   runmd.f > _runmd.f
f90 -c -O2   -free  -o runmd.o _runmd.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  getcor.f > _getcor.f
f90 -c -O1   -free  -o getcor.o _getcor.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  r6ave.f > _r6ave.f
f90 -c -O1   -free  -o r6ave.o _r6ave.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  r6drv.f > _r6drv.f
f90 -c -O1   -free  -o r6drv.o _r6drv.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  aveint.f > _aveint.f
f90 -c -O1   -free  -o aveint.o _aveint.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  degcnt.f > _degcnt.f
f90 -c -O1   -free  -o degcnt.o _degcnt.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  corf.f > _corf.f
f90 -c -O1   -free  -o corf.o _corf.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   threeb.f > _threeb.f
f90 -c -O2   -free  -o threeb.o _threeb.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   tripl.f > _tripl.f
f90 -c -O2   -free  -o tripl.o _tripl.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmrrad.f > _nmrrad.f
f90 -c -O1   -free  -o nmrrad.o _nmrrad.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  decnvh.f > _decnvh.f
f90 -c -O1   -free  -o decnvh.o _decnvh.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  echoin.f > _echoin.f
f90 -c -O1   -free  -o echoin.o _echoin.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  parallel.f > _parallel.f
f90 -c -O1   -free  -o parallel.o _parallel.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  jnrg.f > _jnrg.f
f90 -c -O1   -free  -o jnrg.o _jnrg.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   shake.f > _shake.f
f90 -c -O2   -free  -o shake.o _shake.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ene.f > _ene.f
f90 -c -O2   -free  -o ene.o _ene.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  mdwrit.f > _mdwrit.f
f90 -c -O1   -free  -o mdwrit.o _mdwrit.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  minrit.f > _minrit.f
f90 -c -O1   -free  -o minrit.o _minrit.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  set.f > _set.f
f90 -c -O1   -free  -o set.o _set.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  setmm.f > _setmm.f
f90 -c -O1   -free  -o setmm.o _setmm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  dynlib.f > _dynlib.f
f90 -c -O1   -free  -o dynlib.o _dynlib.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  mdfil.f > _mdfil.f
f90 -c -O1   -free  -o mdfil.o _mdfil.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  nmlsrc.f > _nmlsrc.f
f90 -c -O1   -free  -o nmlsrc.o _nmlsrc.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_force.f > _ew_force.f
f90 -c -O2   -free  -o ew_force.o _ew_force.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_setup.f > _ew_setup.f
f90 -c -O2   -free  -o ew_setup.o _ew_setup.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_box.f > _ew_box.f
f90 -c -O2   -free  -o ew_box.o _ew_box.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_bspline.f > _ew_bspline.f
f90 -c -O2   -free  -o ew_bspline.o _ew_bspline.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_fft.f > _ew_fft.f
f90 -c -O2   -free  -o ew_fft.o _ew_fft.f

         if ( isign == -1) call cfftf(n1,work,table(1,1))
                                         ^                
"_ew_fft.f", Line = 2343, Column = 42: WARNING: Procedure "CFFTF" is defined at line 1453 (_ew_fft.f).  The actual argument type does not agree with the type of dummy argument "C".

         if ( isign == 1) call cfftb(n1,work,table(1,1))
                                        ^                
"_ew_fft.f", Line = 2344, Column = 41: WARNING: Procedure "CFFTB" is defined at line 1369 (_ew_fft.f).  The actual argument type does not agree with the type of dummy argument "C".

         if ( isign == -1) call cfftf(n2,work,table(1,2))
                                         ^                
"_ew_fft.f", Line = 2358, Column = 42: WARNING: Procedure "CFFTF" is defined at line 1453 (_ew_fft.f).  The actual argument type does not agree with the type of dummy argument "C".

         if ( isign == 1) call cfftb(n2,work,table(1,2))
                                        ^                
"_ew_fft.f", Line = 2359, Column = 41: WARNING: Procedure "CFFTB" is defined at line 1369 (_ew_fft.f).  The actual argument type does not agree with the type of dummy argument "C".

         if ( isign == -1) call cfftf(n3,work,table(1,3))
                                         ^                
"_ew_fft.f", Line = 2373, Column = 42: WARNING: Procedure "CFFTF" is defined at line 1453 (_ew_fft.f).  The actual argument type does not agree with the type of dummy argument "C".

         if ( isign == 1) call cfftb(n3,work,table(1,3))
                                        ^                
"_ew_fft.f", Line = 2374, Column = 41: WARNING: Procedure "CFFTB" is defined at line 1369 (_ew_fft.f).  The actual argument type does not agree with the type of dummy argument "C".

f90: COMPILE TIME 1.880000 SECONDS
f90: MAXIMUM FIELD LENGTH 5167662 DECIMAL WORDS
f90: 2402 SOURCE LINES
f90: 0 ERRORS, 6 WARNINGS, 0 OTHER MESSAGES, 0 ANSI
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_direct.f > _ew_direct.f
f90 -c -O2   -free  -o ew_direct.o _ew_direct.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_recip.f > _ew_recip.f
f90 -c -O2   -free  -o ew_recip.o _ew_recip.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   pcshift.f > _pcshift.f
f90 -c -O2   -free  -o pcshift.o _pcshift.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  align.f > _align.f
f90 -c -O1   -free  -o align.o _align.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   rstack.f > _rstack.f
f90 -c -O2   -free  -o rstack.o _rstack.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   istack.f > _istack.f
f90 -c -O2   -free  -o istack.o _istack.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  rfree.f > _rfree.f
f90 -c -O1   -free  -o rfree.o _rfree.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  rgroup.f > _rgroup.f
f90 -c -O1   -free  -o rgroup.o _rgroup.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  random.f > _random.f
f90 -c -O1   -free  -o random.o _random.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  lsqfit.f > _lsqfit.f
f90 -c -O1   -free  -o lsqfit.o _lsqfit.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  amopen.f > _amopen.f
f90 -c -O1   -free  -o amopen.o _amopen.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   debug.f > _debug.f
f90 -c -O2   -free  -o debug.o _debug.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_recip_reg.f > _ew_recip_reg.f
f90 -c -O2   -free  -o ew_recip_reg.o _ew_recip_reg.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_handle_dips.f > _ew_handle_dips.f
f90 -c -O2   -free  -o ew_handle_dips.o _ew_handle_dips.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   ew_dipole_recip.f > _ew_dipole_recip.f
f90 -c -O2   -free  -o ew_dipole_recip.o _ew_dipole_recip.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  mexit.f > _mexit.f
f90 -c -O1   -free  -o mexit.o _mexit.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   new_time.f > _new_time.f
f90 -c -O2   -free  -o new_time.o _new_time.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   extra_pts.f > _extra_pts.f
f90 -c -O2   -free  -o extra_pts.o _extra_pts.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  thermo_int.f > _thermo_int.f
f90 -c -O1   -free  -o thermo_int.o _thermo_int.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  matinv.f > _matinv.f
f90 -c -O1   -free  -o matinv.o _matinv.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  assert.f > _assert.f
f90 -c -O1   -free  -o assert.o _assert.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  mmtsb.f > _mmtsb.f
f90 -c -O1   -free  -o mmtsb.o _mmtsb.f
cc -c -DSYSV    -o mmtsb_client.o mmtsb_client.c
ucbcc: Warning: Option -YP,:/usr/ucblib:/opt/SUNWspro/WS6U2/bin/../lib:/opt/SUNWspro/WS6U2/bin:/usr/ccs/lib:/usr/lib passed to ld, if ld is invoked, ignored otherwise
"mmtsb_client.c", line 379: warning: empty translation unit
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   erfcfun.f > _erfcfun.f
f90 -c -O2   -free  -o erfcfun.o _erfcfun.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   veclib.f > _veclib.f
f90 -c -O2   -free  -o veclib.o _veclib.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  mdm.f > _mdm.f
f90 -c -O1   -free  -o mdm.o _mdm.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   pb_init.f > _pb_init.f
f90 -c -O2   -free  -o pb_init.o _pb_init.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include   constantph.f > _constantph.f
f90 -c -O2   -free  -o constantph.o _constantph.f
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  prn_dipoles.f > _prn_dipoles.f
f90 -c -O1   -free  -o prn_dipoles.o _prn_dipoles.f
cd ../lib; make sys.a
/lib/cpp -P -I/usr2/users/anshul/amber8//src/include  sys.f > _sys.f
f90 -c -O1     -o sys.o _sys.f
cc -c -DSYSV    -o wallclock.o wallclock.c
ucbcc: Warning: Option -YP,:/usr/ucblib:/opt/SUNWspro/WS6U2/bin/../lib:/opt/SUNWspro/WS6U2/bin:/usr/ccs/lib:/usr/lib passed to ld, if ld is invoked, ignored otherwise
"wallclock.c", line 14: syntax error before or at: __DATE__
"wallclock.c", line 14: warning: old-style declaration or incorrect type for: __DATE__
"wallclock.c", line 14: warning: old-style declaration or incorrect type for: __TIME__
*** Error code 2
make: Fatal error: Command failed for target `wallclock.o'
Current working directory /usr2/users/anshul/amber8/src/lib
*** Error code 1
make: Fatal error: Command failed for target `syslib'
Current working directory /usr2/users/anshul/amber8/src/sander
*** Error code 1
make: Fatal error: Command failed for target `serial'