#!/bin/csh # # if this shell doesnot retain environment variables # like the path, it maybe necessary to: # source .login set deldir=$DELDIR/data echo ' ' echo '***************************************************' echo 'sets up a quick run for qdiffxs in DelPhi using' echo 'default parameters' echo 'directory containing default files is:' echo $deldir echo '***************************************************' echo ' ' if ($1 == '' ) then echo -n ' enter full brookhaven file name (with .pdb)>>' set p1=$< else set p1=$1 endif set name=$p1:r # if ( -e $p1 == '0') then echo ' cannot find pdb file' exit endif echo ' ' echo ' setting up file assignements for ' $name if ( -e fort.13 ) then /bin/rm fort* endif ln -s $deldir'/default.prm' fort.10 ln -s $deldir'/default.siz' fort.11 ln -s $deldir'/default.crg' fort.12 ln -s $name'.pdb' fort.13 ln -s $name'.phi' fort.14 ln -s $name'.eps' fort.17 ln -s $name'out.pdb' fort.19 echo ' ' echo ' ' echo ' running qdiffxs..' qdiffxs > $name'.log' echo ' qdiffxs finished, logfile output is in' $name'.log' /bin/rm fort*