On Fri, May 28, 2004, Amber admin wrote:
>
> As you suggested, I assigned a proper value to the $LOADLIB variable in
> my config.h. Then the error changes to :
>
> init.o constantph.o prn_dipoles.o \
> ../lmod/lmod.a
> /usr/local/mpich/1.2.5..12/gm-2.1.1nks2smp/smp/intel32/ssh/lib \
> ../lapack/lapack.a ../blas/blas.a ../lib/nxtsec.o ../lib/sys.a
> /usr/local/mpich/1.2.5..12/gm-2.1.1nks2smp/smp/intel32/ssh/lib: file not
> recognized: Is a directory
> make[1]: *** [sander] Error 1
> make[1]: Leaving directory `/nfs/s1r1p2/xinchen/amber8/src/sander'
> make: *** [parallel] Error 2
Did you use the "-mpi" or the "-mpich" flag? It should be the latter
for mpich, and none of this might be necessary.
As the error message above states, you are providing a directory, not a
library, in the LOADLIB variable. Study what configure does with the -mpich
flag, and try to work from there.
For the future, you should give some indication of what sort of machine and
operating system you are talking about.
.....dac
--
==================================================================
David A. Case | e-mail: case.scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
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Received on Fri May 28 2004 - 18:53:00 PDT
