AMBER: separate the longitudinal and transverse vibrations frequencies

From: xiaowei li <xl3a.virginia.edu>
Date: Tue, 04 May 2004 00:33:11 -0400

Dear AMBER users:
     With the nice help of David and other AMBER community members, I
now can get the normal frequencies and eigenvectors of DNA with limited
number of base pairs.
     However, I am facing a new question how to separate the
longitudinal and transverse vibrations frequencies and eigenvectors
because the outputs from AMBER mix all the frequencies and eigenvectors
together. I want to know if there is any way by which I can get the
eigenfrequencies and eigenvectors of each direction (x, y, z)
respectively. Thank you in advance.
-- 
Xiaowei Li
Department of Electrical and Computer Engineering
University of Virginia
924-3446(O)
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Received on Tue May 04 2004 - 05:53:01 PDT
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