AMBER: residence time

From: Ioana Cozmuta <>
Date: Tue, 23 Mar 2004 19:51:10 -0800 (PST)


Is there a standard procedure to calculate residence times of ions around
certain amino acids from MD trajectories? Does anyone have a script
already written to do that? Or is it up to each individual how to define
and calculate such a quantity?

Thank you,

Ioana Cozmuta, PhD
Research Scientist Eloret Corporation
Mail Stop 230-3
NASA AMES Research Center
Moffet Field, CA 94035-1000
Phone: (650) 604-0993
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Received on Wed Mar 24 2004 - 04:53:00 PST
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