Amber Archive Jan 2004 by thread
239 messages
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Starting
Wed Jan 14 2004 - 15:53:13 PST,
Ending
Sat Jan 31 2004 - 23:53:00 PST
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Re: AMBER: Antechamber & Ptraj/Rdparm
L Jin
(Thu Jan 01 2004 - 02:47:18 PST)
Re: AMBER: Antechamber & Ptraj/Rdparm
zhaoxc.puccini.che.pitt.edu
(Thu Jan 01 2004 - 07:05:31 PST)
Re: AMBER: Antechamber & Ptraj/Rdparm
Bill Ross
(Thu Jan 01 2004 - 14:26:55 PST)
AMBER: Molecular Frame
Byungchan Kim
(Thu Jan 01 2004 - 19:46:14 PST)
Re: AMBER: Molecular Frame
David A. Case
(Fri Jan 02 2004 - 08:22:10 PST)
Re: AMBER: Molecular Frame
Byungchan Kim
(Fri Jan 02 2004 - 15:03:36 PST)
Re: AMBER: Molecular Frame
David A. Case
(Sat Jan 03 2004 - 07:51:13 PST)
Re: AMBER: Molecular Frame
Bill Ross
(Fri Jan 02 2004 - 15:40:54 PST)
Re: AMBER: Molecular Frame
Byungchan Kim
(Sat Jan 03 2004 - 11:00:20 PST)
AMBER: algorithm used in AMBER
A. Hungie
(Fri Jan 02 2004 - 02:07:11 PST)
RE: AMBER: algorithm used in AMBER
Ross Walker
(Fri Jan 02 2004 - 05:05:13 PST)
AMBER: force field
A. Hungie
(Fri Jan 02 2004 - 04:28:59 PST)
RE: AMBER: force field
Ross Walker
(Fri Jan 02 2004 - 04:55:24 PST)
AMBER: rms in ptraj
L Jin
(Mon Jan 05 2004 - 06:49:47 PST)
Re: AMBER: rms in ptraj
Thomas E. Cheatham, III
(Mon Jan 05 2004 - 08:04:20 PST)
AMBER: File format generated by respgen
Lishan Yao
(Mon Jan 05 2004 - 08:50:38 PST)
AMBER: prep file
Youyi Peng
(Mon Jan 05 2004 - 15:40:07 PST)
Re: AMBER: prep file
James W. Caldwell
(Mon Jan 05 2004 - 16:01:20 PST)
Re: AMBER: prep file
Bill Ross
(Mon Jan 05 2004 - 15:49:14 PST)
AMBER: Radius of gyration
Bimo Ario Tejo
(Mon Jan 05 2004 - 22:14:37 PST)
Re: AMBER: Radius of gyration
Alexey Onufriev
(Tue Jan 06 2004 - 10:59:24 PST)
AMBER: Parameters for deuterium
Charlie Laughton
(Tue Jan 06 2004 - 07:17:46 PST)
Re: AMBER: Parameters for deuterium
David A. Case
(Tue Jan 06 2004 - 08:32:14 PST)
AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning
Robert Duke
(Tue Jan 06 2004 - 12:20:44 PST)
Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning
Andreas Svrcek-Seiler
(Wed Jan 07 2004 - 04:12:30 PST)
Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning
Viktor Hornak
(Wed Jan 07 2004 - 05:46:28 PST)
Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning
Robert Duke
(Wed Jan 07 2004 - 06:31:19 PST)
Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning
Robert Duke
(Wed Jan 07 2004 - 06:17:27 PST)
Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning
David E. Konerding
(Wed Jan 07 2004 - 08:16:49 PST)
AMBER: Atom type
L Jin
(Wed Jan 07 2004 - 03:26:25 PST)
AMBER: strange output of MD
L Jin
(Wed Jan 07 2004 - 08:42:49 PST)
Re: AMBER: strange output of MD
Rhonda Torres
(Wed Jan 07 2004 - 09:48:54 PST)
Re: AMBER: strange output of MD
Bill Ross
(Wed Jan 07 2004 - 09:57:13 PST)
Re: AMBER: strange output of MD
L Jin
(Wed Jan 07 2004 - 10:21:03 PST)
Re: AMBER: strange output of MD
Bill Ross
(Wed Jan 07 2004 - 10:39:35 PST)
Re: AMBER: Atom type
Rhonda Torres
(Wed Jan 07 2004 - 10:09:17 PST)
Re: AMBER: Atom type
Rhonda Torres
(Wed Jan 07 2004 - 10:55:40 PST)
AMBER: .crg file for Delphi
a b
(Wed Jan 07 2004 - 10:22:34 PST)
AMBER: modeling GPCR in lipid environment
Giulio Rastelli
(Thu Jan 08 2004 - 08:49:53 PST)
Re: AMBER: modeling GPCR in lipid environment
Alexey Onufriev
(Thu Jan 08 2004 - 11:08:01 PST)
AMBER: Minimiation (AMBER5/AMBER7) does not reach the tageted rmsd
Anna Schrey
(Thu Jan 08 2004 - 02:30:37 PST)
Re: AMBER: Minimiation (AMBER5/AMBER7) does not reach the tageted rmsd
David A. Case
(Thu Jan 08 2004 - 16:15:12 PST)
Re: AMBER: Minimiation (AMBER5/AMBER7) does not reach the tageted rmsd
Anna Schrey
(Fri Jan 23 2004 - 02:39:47 PST)
AMBER: Vlimit problem
Yuqin Cai
(Thu Jan 08 2004 - 10:15:38 PST)
Re: AMBER: Vlimit problem
David A. Case
(Thu Jan 08 2004 - 16:31:00 PST)
Re: AMBER: Vlimit problem
Thomas E. Cheatham, III
(Fri Jan 09 2004 - 13:53:10 PST)
AMBER: running on Itanium machines
northrop.chem.ucla.edu
(Thu Jan 08 2004 - 11:14:52 PST)
Re: AMBER: running on Itanium machines
David A. Case
(Fri Jan 09 2004 - 08:43:48 PST)
Re: AMBER: running on Itanium machines
northrop.chem.ucla.edu
(Fri Jan 09 2004 - 11:28:56 PST)
AMBER: Amber compilation in IBM-SP4
Jiten
(Sat Jan 10 2004 - 00:28:12 PST)
Re: AMBER: Amber compilation in IBM-SP4
David A. Case
(Sat Jan 10 2004 - 10:43:06 PST)
AMBER: references?
a b
(Sun Jan 11 2004 - 06:40:50 PST)
Re: AMBER: references?
Martin Lepsik
(Thu Jan 29 2004 - 07:32:23 PST)
AMBER: Improper dihedral
Herbert Georg
(Mon Jan 12 2004 - 06:23:22 PST)
Re: AMBER: Improper dihedral
Bill Ross
(Mon Jan 12 2004 - 11:23:44 PST)
Re: AMBER: Improper dihedral
Herbert Georg
(Mon Jan 12 2004 - 11:39:12 PST)
Re: AMBER: Improper dihedral
Bill Ross
(Mon Jan 12 2004 - 11:52:53 PST)
Re: AMBER: Improper dihedral
Herbert Georg
(Mon Jan 12 2004 - 12:21:39 PST)
Re: AMBER: Improper dihedral
David A. Case
(Mon Jan 12 2004 - 12:14:22 PST)
Re: AMBER: Improper dihedral
Herbert Georg
(Tue Jan 13 2004 - 07:36:29 PST)
Re: AMBER: Improper dihedral
Bill Ross
(Mon Jan 12 2004 - 10:21:03 PST)
Re: AMBER: Improper dihedral
Herbert Georg
(Mon Jan 12 2004 - 10:57:39 PST)
AMBER: disulfide bonds
Wen Li
(Mon Jan 12 2004 - 13:56:26 PST)
Re: AMBER: disulfide bonds
David A. Case
(Mon Jan 12 2004 - 17:54:48 PST)
Re: AMBER: disulfide bonds/ Engineered
bishop
(Tue Jan 13 2004 - 06:20:19 PST)
Re: AMBER: disulfide bonds
Wen Li
(Tue Jan 13 2004 - 10:13:50 PST)
Re: AMBER: disulfide bonds
David A. Case
(Tue Jan 13 2004 - 10:57:25 PST)
AMBER: error in minimization
Itziar Maestre Asenjo
(Tue Jan 13 2004 - 07:12:22 PST)
Re: AMBER: error in minimization
David A. Case
(Tue Jan 13 2004 - 08:48:50 PST)
Re: AMBER: error in minimization
Itziar Maestre Asenjo
(Wed Jan 14 2004 - 22:58:46 PST)
Re: AMBER:
charris5
(Tue Jan 13 2004 - 11:07:33 PST)
Re: AMBER:
Michael George Lerner
(Tue Jan 13 2004 - 11:18:57 PST)
AMBER: LEAP - Error loading units
Miguel de Federico
(Wed Jan 14 2004 - 09:12:29 PST)
AMBER: DMF box
Stefano.Pieraccini.unimi.it
(Wed Jan 14 2004 - 08:42:02 PST)
Re: AMBER: LEAP - Error loading units
Bill Ross
(Wed Jan 14 2004 - 11:45:19 PST)
AMBER: "ATTN, need revision"
klamothe.uiuc.edu
(Wed Jan 14 2004 - 12:07:56 PST)
Re: AMBER: "ATTN, need revision"
Junmei Wang
(Wed Jan 14 2004 - 12:39:47 PST)
AMBER: free energy profile calculation
Martina Roeselova
(Wed Jan 14 2004 - 13:14:48 PST)
Re: AMBER: free energy profile calculation
David Smith
(Thu Jan 15 2004 - 06:37:27 PST)
Re: AMBER: free energy profile calculation
David A. Case
(Thu Jan 15 2004 - 08:32:17 PST)
AMBER: NTF
L Jin
(Fri Jan 16 2004 - 03:15:16 PST)
Re: AMBER: NTF
David A. Case
(Fri Jan 16 2004 - 08:09:27 PST)
AMBER: atom type CM
Kristina Furse
(Fri Jan 16 2004 - 12:37:38 PST)
Re: AMBER: atom type CM
Junmei Wang
(Fri Jan 16 2004 - 13:13:19 PST)
RE: AMBER: atom type CM
Kristina Furse
(Fri Jan 16 2004 - 13:56:47 PST)
RE: AMBER: atom type CM
Junmei Wang
(Tue Jan 20 2004 - 08:43:23 PST)
Re: AMBER: atom type CM
Bill Ross
(Fri Jan 16 2004 - 13:17:29 PST)
AMBER: GB and Atom Type
Steve Seibold
(Tue Jan 20 2004 - 07:34:45 PST)
Re: AMBER: GB and Atom Type
David A. Case
(Tue Jan 20 2004 - 15:03:52 PST)
AMBER: Question for PMEMD users
Robert Duke
(Tue Jan 20 2004 - 08:05:38 PST)
AMBER: restraint
tang kwa
(Tue Jan 20 2004 - 08:10:39 PST)
Re: AMBER: restraint
David A. Case
(Tue Jan 20 2004 - 15:05:59 PST)
AMBER: Parm98 Vs 02
A.Madhumalar
(Tue Jan 20 2004 - 08:27:03 PST)
Re: AMBER: Parm98 Vs 02
David A. Case
(Tue Jan 20 2004 - 15:08:57 PST)
Re: AMBER: Parm98 Vs 02
A.Madhumalar
(Wed Jan 21 2004 - 09:01:31 PST)
AMBER: PDB files
Beale, John
(Tue Jan 20 2004 - 08:43:36 PST)
Re: AMBER: PDB files
David A. Case
(Tue Jan 20 2004 - 15:12:04 PST)
AMBER: Do I need to repeat MD simulation?
aini.UMDNJ.EDU
(Tue Jan 20 2004 - 15:43:00 PST)
Re: AMBER: Do I need to repeat MD simulation?
Andreas Svrcek-Seiler
(Wed Jan 21 2004 - 02:40:17 PST)
Re: AMBER: Do I need to repeat MD simulation?
Robert Duke
(Wed Jan 21 2004 - 05:44:22 PST)
Re: AMBER: Do I need to repeat MD simulation?
bishop
(Wed Jan 21 2004 - 07:14:45 PST)
Re: AMBER: Do I need to repeat MD simulation?
Bill Ross
(Wed Jan 21 2004 - 08:01:54 PST)
Re: AMBER: Do I need to repeat MD simulation?
aini.UMDNJ.EDU
(Wed Jan 21 2004 - 10:42:30 PST)
AMBER: segmentation fault in Leap
Ioana Cozmuta
(Tue Jan 20 2004 - 20:39:28 PST)
Re: AMBER: segmentation fault in Leap
Bill Ross
(Wed Jan 21 2004 - 01:47:58 PST)
Re: AMBER: segmentation fault in Leap
Ioana Cozmuta
(Wed Jan 21 2004 - 21:56:10 PST)
Re: AMBER: segmentation fault in Leap
David E. Konerding
(Thu Jan 22 2004 - 07:22:47 PST)
Re: AMBER: segmentation fault in Leap
Bill Ross
(Thu Jan 22 2004 - 09:37:09 PST)
Re: AMBER: segmentation fault in Leap
Ioana Cozmuta
(Thu Jan 22 2004 - 23:26:41 PST)
AMBER: Errors in MM-PBSA???
ML
(Wed Jan 21 2004 - 03:46:35 PST)
Re: AMBER: Errors in MM-PBSA???
Holger Gohlke
(Wed Jan 21 2004 - 04:37:39 PST)
AMBER: NMODE via MM-PBSA
ML
(Wed Jan 21 2004 - 04:03:31 PST)
Re: AMBER: NMODE via MM-PBSA
Holger Gohlke
(Wed Jan 21 2004 - 04:49:48 PST)
Re: AMBER: NMODE via MM-PBSA
ML
(Wed Jan 21 2004 - 05:42:29 PST)
AMBER: antechamber and mopac5010mn
S. Frank Yan
(Wed Jan 21 2004 - 07:37:25 PST)
Re: AMBER: antechamber and mopac5010mn
David A. Case
(Wed Jan 21 2004 - 08:41:53 PST)
AMBER: crystal lattice determination
Scott Brozell
(Wed Jan 21 2004 - 08:51:37 PST)
Re: AMBER: crystal lattice determination
David A. Case
(Thu Jan 22 2004 - 17:20:42 PST)
AMBER: oxs g5 machine file
Knut Langsetmo
(Wed Jan 21 2004 - 12:10:33 PST)
AMBER: crosslink a residue with a small molecule
Eric Hu
(Wed Jan 21 2004 - 13:41:08 PST)
AMBER: prep file for zinc finger
Wen Li
(Wed Jan 21 2004 - 14:02:54 PST)
AMBER: remove rotational motion
Itziar Maestre Asenjo
(Wed Jan 21 2004 - 23:39:15 PST)
Re: AMBER: remove rotational motion
David A. Case
(Thu Jan 22 2004 - 17:21:03 PST)
AMBER: How does LEaP place Na+ ions?
tang kwa
(Thu Jan 22 2004 - 02:10:16 PST)
Re: AMBER: How does LEaP place Na+ ions?
Jose Ramon Blas
(Thu Jan 22 2004 - 13:38:03 PST)
Re: AMBER: How does LEaP place Na+ ions?
Bill Ross
(Thu Jan 22 2004 - 09:17:32 PST)
Re: AMBER: How does LEaP place Na+ ions?
Jiten
(Sun Jan 25 2004 - 17:44:36 PST)
AMBER: restrt
L Jin
(Thu Jan 22 2004 - 03:03:51 PST)
Re: AMBER: restrt
Dr. Yong Duan
(Thu Jan 22 2004 - 05:24:40 PST)
Re: AMBER: restrt
L Jin
(Thu Jan 22 2004 - 06:05:03 PST)
Re: AMBER: restrt
Dr. Yong Duan
(Thu Jan 22 2004 - 18:27:05 PST)
Re: AMBER: restrt
Bill Ross
(Thu Jan 22 2004 - 09:15:58 PST)
Re: AMBER: How does LEaP place Na+ ions?
Bill Ross
(Thu Jan 22 2004 - 09:12:07 PST)
AMBER: Segmentation fault (core dumped) error of antechamber program
S. Frank Yan
(Thu Jan 22 2004 - 11:36:54 PST)
Re: AMBER: Segmentation fault (core dumped) error of antechamber program
David A. Case
(Thu Jan 22 2004 - 17:21:40 PST)
AMBER: oxygen positions around a DNA
Ioana Cozmuta
(Thu Jan 22 2004 - 18:19:51 PST)
AMBER: Problem using GLYCAM with sander
Itziar Maestre Asenjo
(Fri Jan 23 2004 - 09:05:52 PST)
Re: AMBER: Problem using GLYCAM with sander
David A. Case
(Fri Jan 23 2004 - 13:41:22 PST)
Re: AMBER: Problem using GLYCAM with sander
Bimo Ario Tejo
(Sat Jan 24 2004 - 07:28:15 PST)
AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7
Ilyas Yildirim
(Fri Jan 23 2004 - 10:18:23 PST)
Re: AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7
Joey Harriman
(Fri Jan 23 2004 - 10:43:43 PST)
Re: AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7
FyD
(Fri Jan 23 2004 - 11:52:28 PST)
Re: AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7
Bill Ross
(Fri Jan 23 2004 - 11:26:15 PST)
AMBER: phosphothreonine
Youyi Peng
(Fri Jan 23 2004 - 14:57:06 PST)
AMBER: Fwd: NVE & polarizable force field]
Martina Roeselova
(Fri Jan 23 2004 - 18:16:32 PST)
Re: AMBER: Fwd: NVE & polarizable force field]
Byungchan Kim
(Fri Jan 23 2004 - 18:58:04 PST)
Re: AMBER: Fwd: NVE & polarizable force field]
darden
(Sat Jan 24 2004 - 13:14:55 PST)
Re: AMBER: Fwd: NVE & polarizable force field]
David A. Case
(Sat Jan 24 2004 - 17:18:45 PST)
AMBER: Memory for AMBER 6 simulation
Sergey
(Sat Jan 24 2004 - 01:22:56 PST)
Re: AMBER: Memory for AMBER 6 simulation
Bimo Ario Tejo
(Mon Jan 26 2004 - 02:39:25 PST)
AMBER: NTR force constant for restraint !!
Jiten
(Sat Jan 24 2004 - 23:37:09 PST)
AMBER: Cartitian Restraint Error
Jiten
(Sun Jan 25 2004 - 06:17:11 PST)
Re: AMBER: Cartitian Restraint Error
Jiten
(Sun Jan 25 2004 - 06:26:31 PST)
Re: AMBER: Cartitian Restraint Error
Bill Ross
(Sun Jan 25 2004 - 11:39:58 PST)
Re: AMBER: Cartitian Restraint Error
Jiten
(Sun Jan 25 2004 - 17:36:24 PST)
Re: AMBER: how to correctly change frcmod?
David A. Case
(Sun Jan 25 2004 - 17:17:47 PST)
AMBER: mopac.sh
Beale, John
(Mon Jan 26 2004 - 06:31:46 PST)
Re: AMBER: mopac.sh
Joey Harriman
(Mon Jan 26 2004 - 06:46:31 PST)
AMBER: B factors from simulation and from cryst
Vlad Cojocaru
(Mon Jan 26 2004 - 08:21:50 PST)
Re: AMBER: B factors from simulation and from cryst
Joseph Nachman
(Mon Jan 26 2004 - 13:23:49 PST)
AMBER: B factors --- one more explanation
Vlad Cojocaru
(Mon Jan 26 2004 - 08:25:47 PST)
Re: AMBER: ambpdb in AMBER7
Bill Ross
(Mon Jan 26 2004 - 14:40:12 PST)
RE: AMBER: ambpdb in AMBER7
Yong Duan
(Mon Jan 26 2004 - 15:34:41 PST)
AMBER: Lattice structures in xleap
Brandon Tefft
(Mon Jan 26 2004 - 21:11:46 PST)
Re: AMBER: Lattice structures in xleap
Bill Ross
(Mon Jan 26 2004 - 23:52:38 PST)
AMBER: trajectory file corruption
John
(Tue Jan 27 2004 - 03:11:54 PST)
Re: AMBER: trajectory file corruption
Peter Oelschlaeger
(Tue Jan 27 2004 - 10:27:44 PST)
Re: AMBER: trajectory file corruption
James W. Caldwell
(Tue Jan 27 2004 - 10:30:20 PST)
Re: AMBER: trajectory file corruption
Bill Ross
(Tue Jan 27 2004 - 10:54:30 PST)
AMBER: dielectric constant
John
(Wed Jan 28 2004 - 06:20:16 PST)
Re: AMBER: dielectric constant
Martin Lepsik
(Wed Jan 28 2004 - 07:42:05 PST)
Re: AMBER: Which program to use to visualize the RESP Outputs
FyD
(Tue Jan 27 2004 - 08:59:51 PST)
Re: AMBER: Which program to use to visualize the RESP Outputs
Ilyas Yildirim
(Tue Jan 27 2004 - 10:49:01 PST)
Re: AMBER: ambpdb in AMBER7
xhu1.memphis.edu
(Tue Jan 27 2004 - 09:48:37 PST)
AMBER: compilation under fedora core 1
Carsten Detering
(Tue Jan 27 2004 - 10:51:26 PST)
Re: AMBER: compilation under fedora core 1
James W. Caldwell
(Tue Jan 27 2004 - 10:40:48 PST)
AMBER: Error message in antechamber
Ilyas Yildirim
(Tue Jan 27 2004 - 10:44:26 PST)
AMBER: A few questions in the protein unfolding simulations using GB model
Jiayun Pang
(Tue Jan 27 2004 - 12:33:15 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model
Bill Ross
(Wed Jan 28 2004 - 10:21:10 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model
Carlos Simmerling
(Wed Jan 28 2004 - 10:26:31 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model
Jiayun Pang
(Thu Jan 29 2004 - 02:47:52 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model
Andy Purkiss
(Thu Jan 29 2004 - 06:19:22 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model
David A. Case
(Thu Jan 29 2004 - 19:59:24 PST)
RE: AMBER: A few questions in the protein unfolding simulations using GB model
Bill Ross
(Wed Jan 28 2004 - 10:22:55 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model
Bill Ross
(Tue Jan 27 2004 - 13:19:10 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model
Jiayun Pang
(Wed Jan 28 2004 - 04:20:48 PST)
RE: AMBER: A few questions in the protein unfolding simulations using GB model
florent.barbault
(Wed Jan 28 2004 - 04:38:13 PST)
AMBER: SANDER - Abnormal high velocities
Miguel de Federico
(Wed Jan 28 2004 - 03:16:45 PST)
Re: AMBER: SANDER - Abnormal high velocities
David A. Case
(Wed Jan 28 2004 - 08:31:18 PST)
Re: AMBER: SANDER - Abnormal high velocities
Carlos Simmerling
(Wed Jan 28 2004 - 08:36:45 PST)
AMBER: Normal modes of protein-ligand
Martin Lepsik
(Wed Jan 28 2004 - 05:43:12 PST)
Re: AMBER: Normal modes of protein-ligand
bishop
(Wed Jan 28 2004 - 06:44:20 PST)
Re: AMBER: Normal modes of protein-ligand
Holger Gohlke
(Wed Jan 28 2004 - 11:38:57 PST)
Re: AMBER: Normal modes of protein-ligand
Holger Gohlke
(Wed Jan 28 2004 - 11:32:49 PST)
Re: AMBER: Normal modes of protein-ligand
Martin Lepsik
(Thu Jan 29 2004 - 01:47:22 PST)
AMBER: LES question
Lishan Yao
(Wed Jan 28 2004 - 10:52:58 PST)
Re: AMBER: LES question
Carlos Simmerling
(Wed Jan 28 2004 - 11:03:04 PST)
Re: AMBER: LES question
Lishan Yao
(Thu Jan 29 2004 - 06:46:22 PST)
Re: AMBER: LES question
Carlos Simmerling
(Thu Jan 29 2004 - 08:36:04 PST)
Re: AMBER: Ibelly and Ewald error message when ewald should be off
Scott Brozell
(Wed Jan 28 2004 - 21:57:06 PST)
AMBER: sander and mpich
Thomas Exner
(Thu Jan 29 2004 - 00:26:55 PST)
AMBER: CYS, CYX and CYM
Nikolai Smolin
(Thu Jan 29 2004 - 01:56:09 PST)
AMBER: conversion of amber trajectories to gromos /(xtc)
Karin Schleinkofer
(Thu Jan 29 2004 - 05:10:28 PST)
Re: AMBER: conversion of amber trajectories to gromos /(xtc)
Luis Gracia
(Thu Jan 29 2004 - 12:27:48 PST)
Re: AMBER: conversion of amber trajectories to gromos /(xtc)
Bill Ross
(Thu Jan 29 2004 - 12:43:45 PST)
AMBER: XLEAP
L Jin
(Thu Jan 29 2004 - 06:40:28 PST)
Re: AMBER: XLEAP
Martin Lepsik
(Thu Jan 29 2004 - 07:43:18 PST)
Re: AMBER: XLEAP
A.B.S.M Osman gani
(Thu Jan 29 2004 - 07:19:04 PST)
AMBER: Moil View on Linux
Vlad Cojocaru
(Thu Jan 29 2004 - 09:13:57 PST)
Re: AMBER: Moil View on Linux
Carlos Simmerling
(Thu Jan 29 2004 - 09:21:20 PST)
AMBER: LES Simulations
Vlad Cojocaru
(Thu Jan 29 2004 - 09:18:14 PST)
Re: AMBER: LES Simulations
Carlos Simmerling
(Thu Jan 29 2004 - 09:20:45 PST)
AMBER: question about LES simulation
Vlad Cojocaru
(Thu Jan 29 2004 - 08:43:25 PST)
AMBER: LES error
Vlad Cojocaru
(Thu Jan 29 2004 - 12:49:49 PST)
Re: AMBER: LES error
Carlos Simmerling
(Thu Jan 29 2004 - 12:51:28 PST)
AMBER: (No subject)
opitz.che.udel.edu
(Thu Jan 29 2004 - 14:09:47 PST)
Re: AMBER: (No subject)
David A. Case
(Thu Jan 29 2004 - 20:20:43 PST)
Re: AMBER: (No subject)
Junmei Wang
(Fri Jan 30 2004 - 07:02:50 PST)
Re: AMBER: (No subject)
opitz.che.udel.edu
(Fri Jan 30 2004 - 08:21:30 PST)
Re: AMBER: (No subject)
Vlad Cojocaru
(Fri Jan 30 2004 - 08:31:10 PST)
Re: AMBER: (No subject)
opitz.che.udel.edu
(Fri Jan 30 2004 - 13:32:01 PST)
Re: AMBER: (No subject)
Junmei Wang
(Fri Jan 30 2004 - 13:37:46 PST)
AMBER: test
Vlad Cojocaru
(Fri Jan 30 2004 - 05:39:14 PST)
Re: AMBER: sander and mpich (which compilers/mpich work)
Jerry Grooms
(Fri Jan 30 2004 - 15:00:22 PST)
Re: AMBER: sander and mpich (which compilers/mpich work)
Carlos Simmerling
(Fri Jan 30 2004 - 15:09:09 PST)
Re: AMBER: sander and mpich (which compilers/mpich work)
Viktor Hornak
(Fri Jan 30 2004 - 17:23:21 PST)
AMBER: Nose Hoover chain thermostat
Byungchan Kim
(Fri Jan 30 2004 - 17:35:08 PST)
Re: AMBER: sander and mpich (which compilers/mpich work)
Jerry Grooms
(Sat Jan 31 2004 - 12:44:30 PST)
Re: AMBER: sander and mpich (which compilers/mpich work)
Jerry Grooms
(Sat Jan 31 2004 - 15:08:57 PST)
AMBER: sander.LES on IBM SP cluster
Vlad Cojocaru
(Sat Jan 31 2004 - 02:40:56 PST)
Re: AMBER: sander.LES on IBM SP cluster
Carlos Simmerling
(Sat Jan 31 2004 - 06:27:30 PST)
Re: AMBER: sander.LES on IBM SP cluster
Vlad Cojocaru
(Sat Jan 31 2004 - 09:18:56 PST)
AMBER: Installing Amber on IBM AIX cluster
Vlad Cojocaru
(Sat Jan 31 2004 - 10:50:30 PST)
Re: AMBER: sander.LES on IBM SP cluster
David A. Case
(Sat Jan 31 2004 - 11:02:01 PST)
AMBER: AMBER on IBM SP cluster
Vlad Cojocaru
(Sat Jan 31 2004 - 11:07:29 PST)
Re: AMBER: sander.LES on IBM SP cluster
Carlos Simmerling
(Sat Jan 31 2004 - 11:07:50 PST)
Re: AMBER: sander.LES on IBM SP cluster
Vlad Cojocaru
(Sat Jan 31 2004 - 11:20:56 PST)
Re: AMBER: sander.LES on IBM SP cluster
Carlos Simmerling
(Sat Jan 31 2004 - 11:29:23 PST)
AMBER: Unknown Amber Nomeclature
Andrew M K Law
(Sat Jan 31 2004 - 14:17:47 PST)
Last message date
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Sat Jan 31 2004 - 23:53:00 PST
Archived on
: Fri Dec 20 2024 - 05:53:22 PST
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