AMBER: Protein Rotation

From: <Frederico.Miranda.ibmb.uib.no>
Date: Tue, 11 Nov 2003 13:47:44 +0100

Hye, I made a MD simulation for a protein, and used carnal to determine RMS
for each residue, but my protein is rotating during the MD, so I have a great
discrepancy in the values. Is there a way that I could remove the effect of
the rotation when doing the calculation?

Thank you.

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Received on Tue Nov 11 2003 - 13:53:00 PST
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