Re: AMBER: surface code in Amber

From: David E. Konerding <>
Date: Tue, 28 Oct 2003 08:38:56 -0800

Dr. Yong Duan wrote:

>On Mon, 27 Oct 2003, John Lee wrote:
>>I just worried about if there is such a cave. And most possiblly caves
>>collapse due to VDW forces.
>Cavity inside protein can remain as cavity if the overall structure
>can support it. In addition, these cavities can remain "dry".

It shouldn't- it would be a 'vaccuum'. The van der waals forces almost
always adjust to minimize interior


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Received on Tue Oct 28 2003 - 16:53:01 PST
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