Hello amber users,
I build disacchride (two galactose) in xLeap and Unit contains two residues
when I use "desc" command.
I save it in prep format using saveamberprep command but it says the
following message.
>saveamberprep unit myunit.prep
saving prep, residue UNK
UNK: connect0 not defined
UNK: connect1 not defined
saving prep, residue UNK
UNK: connect0 not defined
UNK: connect1 not defined
-- Remember to delete unwanted IMPROPER terms!
I tried to use "set unit.1 connet0 unit.1.XX" and "set unit.1 connect1
unit.1.YY"
Which atoms do I need to use for XX/YY? any atoms in residue 1??
Do I need to use the above same command for residue2?
Thanks in advance.
Mikyung
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Received on Fri Aug 08 2003 - 04:53:00 PDT
