AMBER: temperature problem

From: Lishan Yao <>
Date: 25 Aug 2003 09:37:01 -0400

Hi there:
   I have run a long time MD for my protein in water by using sander. I
am just curious to know what is the temperature of the protein and what
is the temperture of water. So could I find a way to calculate them. I
have a trajectory file and an energy output and a standard output file.
Thanks in advance for your help.


Lishan Yao <>
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Received on Mon Aug 25 2003 - 14:53:00 PDT
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