Re: AMBER: ANAL component

From: David A. Case <>
Date: Wed, 13 Aug 2003 15:45:36 -0700

On Wed, Aug 13, 2003, wrote:
> I have a problem with ANAL. My PBC system contains approx 53000 atoms.
> ANAL is giving me a message indicating that it is unable to allocate
> appropriate memory. It says that it is allocating 0 bytes of memory.
> Am I over loading the buffer? I noticed in the source that memory for
> this activity is dynamically allocated. Is my system simply too large?
> too many atoms?

There was a report like this a short while ago, but no details were ever

What happens with the test cases? (cd amber7/test; make test.anal)?

What is the exact error message? What sort of machine are you on?


David A. Case                     |  e-mail:
Dept. of Molecular Biology, TPC15 |  fax:          +1-858-784-8896
The Scripps Research Institute    |  phone:        +1-858-784-9768
10550 N. Torrey Pines Rd.         |  home page:                   
La Jolla CA 92037  USA            |
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Received on Wed Aug 13 2003 - 23:53:01 PDT
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