Ptraj problem with small molecules

From: Dvira Segal <dvira_at_post.tau.ac.il>
Date: Tue 4 Feb 2003 16:18:11 +0200

 Hello,

I am still having problems loading topology files of small
molecules in ptraj (amber7), even after i changed rdparm.c and recompiled
the package.
When Im running ptraj on methane, for example, I get the following message

 ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN

when i try to load the topology file.

any idea will be appreciated.


By the way: Is anything missing in the patch (bugfix3), since there is a +
on an empty line

-----------------------------------------------------------
 *** rdparm.c 2001/10/02 21:44:46 1.12
--- rdparm.c 2002/03/12 07:28:58 1.13
***************
*** 1647,1654 ****
--- 1647,1656 ----
    } /* END of: if ( parm->IFPERT ) */

    if (parm->JPARM == 1) {
+
      fprintf(stderr, "Reading in LES information...\n");

+ if( newparm ) find_flag( parm->fp, "LES_NTYP" );
      parm->nlestyp = loadAndReturn12I6(parm->fp, 1, "LES, nlestyp");
      loadAndReturn12I6(parm->fp, 0, "");


---------------------------------------------------



 Thanks,

     Dvira



_________________________________________________________________
-----------------------------------------------------------------
 Dvira Segal
 School of Chemistry, Tel Aviv University
 Tel Aviv, 69978 ISRAEL

 Phone: 972-3-640 7634 Fax: 972-3-642 3765
 email: dvira_at_post.tau.ac.il
 http://femto.tau.ac.il/~dvira
__________________________________________________________________
------------------------------------------------------------------
Received on Tue Feb 04 2003 - 06:18:11 PST
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