> how can I get the distances from the ions to the
DNA,
> with either carnal or ptraj, is there a way other
> than typing explicitly all the atoms?
This can be done with DISTRIBUTION DIST in carnal,
define a GROUP for the dna and one for the ions.
See in manual the Example
# DISTRIBUTION EXAMPLE: TWO GROUPS using closest atom
in 1st to each of 2nd
Bill Ross
Received on Mon Nov 25 2002 - 16:51:46 PST
