On Mon, Nov 04, 2002, Ioana Cozmuta wrote:
>
> Is there a way in amber to tell the sander-minimzation procedure to write
> a restart file not only at the end of the minimization procedure but at
> every N steps?
The "ntwr" variable is only active for MD, not minimization. But you could
easily modify the code: just look for how ntwr is used in runmd.f, and
copy those ideas into runmin.f.
..good luck...dac
--
==================================================================
David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
==================================================================
Received on Mon Nov 04 2002 - 13:59:15 PST