On Wed, Oct 23, 2002, Miguel de Federico wrote:
>
> > saveamberparm c6x 20c6x.top 20c6c.crd
> Checking Unit.
> Building topology.
> Building atom parameters.
> For atom: .R<c6x 1>.A<D20 5> Could not find type: DH
The dummy atoms would be defined in the frcmod file you must create for
perturbations like this. Make sure you have performed a command like:
dummyparms = loadAmberParams frcmod
You can then use the "desc" command in LEaP to see if things got read in OK.
..good luck....dac
--
==================================================================
David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
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Received on Wed Oct 23 2002 - 09:35:31 PDT
