Re: Carnal table output

From: Holger Gohlke <>
Date: Fri 18 Oct 2002 08:20:57 -0700


> in the carnal section of the AMBER7 manual it says that one can prevent
> wrapping of locigal lines in the Carnal table output. But I can't find the
> option to set in analin. Does anyone know how to do this ? I don't care
> about readability because the tables will be input for some scripts.

as far as I can see from the code, only the wrap format with a fixed
number of columns is supported for now.

You can use

perl -p -e 's/\n// if(! /LXXX/); s/L\d+//;' table.dat

to convert single lines from a wrapped file into one row. Just replace
the LXXX by the largest L... number in your table.dat file.

Best regards


Dr. Holger Gohlke
Dept. of Molecular Biology, TPC15
The Scripps Research Institute
10550 N. Torrey Pines Rd.
La Jolla CA 92037  USA
phone: +1-858-784-9788
fax:   +1-858-784-8896
Received on Fri Oct 18 2002 - 08:20:57 PDT
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