From: Sue Heavner <sheavner_at_hsc.wvu.edu>
Date: Tue 17 Sep 2002 15:55:04 -0400

We are modeling polyCG 10mers in the B and Z DNA conformations with and without modifications to G6. After equilibrating the systems and running 2ns dyanamics runs we are analyzing the data. The relaive stabilities as reported by mm_pbsa are not quite what we expected. We were wondering if anyone elso has modeled Z DNAs with amber and if there are any special issues or problems. Thank-you, Sue Heavner
Received on Tue Sep 17 2002 - 12:55:04 PDT
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